WTTGseq (ID 336508) - BioProject

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Accession: PRJEB12937 ID: 336508

WTTGseq

The study is to investigate the hypothesis that WGS will determine the origin of VREfm in a cohort of hospitalised patients. More...

Accession	PRJEB12937; ENA-SUBMISSION: ERA570154
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Submission	Registration date: 4-Aug-2016 Wellcome Sanger Institute

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	29662
WGS master	169
SRA Experiments	1099
Protein Sequences	499211
Other datasets
BioSample	1099
Assembly	169

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

150
19
169

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_900179295.1	FXHI00000000	SAMEA3893652	VREN2769	Enterococcus faecium
GCA_900178615.1	FXEV00000000	SAMEA3893536	VREN2303	Enterococcus faecium
GCA_900178585.1	FXEP00000000	SAMEA3893517	VREN2165	Enterococcus faecium
GCA_900178845.1	FXEL00000000	SAMEA3893919	VREN2617	Enterococcus faecium
GCA_900179505.1	FXGY00000000	SAMEA3893553	VREN1631	Enterococcus faecium
GCA_900179805.1	FXKC00000000	SAMEA3893664	VREN3647	Enterococcus faecium
GCA_900179475.1	FXHS00000000	SAMEA3893643	VREN3347	Enterococcus faecium
GCA_900179305.1	FXHG00000000	SAMEA3893637	VREN2171	Enterococcus faecium
GCA_900179085.1	FXGH00000000	SAMEA3893623	VREN3241	Enterococcus faecium
GCA_900178795.1	FXFJ00000000	SAMEA3893538	VREN2304	Enterococcus faecium
GCA_900179255.1	FXGO00000000	SAMEA3893518	VREN1457	Enterococcus faecium
GCA_900179755.1	FXJA00000000	SAMEA3893474	VREN1839	Enterococcus faecium
GCA_900179435.1	FXGQ00000000	SAMEA3893634	VREN3291	Enterococcus faecium
GCA_900178805.1	FXEI00000000	SAMEA3893584	VREN2832	Enterococcus faecium
GCA_900179865.1	FXJB00000000	SAMEA3893600	VREN1811	Enterococcus faecium
GCA_900178605.1	FXEM00000000	SAMEA3893533	VREN2302	Enterococcus faecium
GCA_900179925.1	FXJD00000000	SAMEA3893492	VREN1871	Enterococcus faecium
GCA_900179905.1	FXJZ00000000	SAMEA3893593	VREN1807	Enterococcus faecium
GCA_900178815.1	FXFW00000000	SAMEA3893552	VREN2654	Enterococcus faecium
GCA_900179445.1	FXHU00000000	SAMEA3893636	VREN3293	Enterococcus faecium
GCA_900178665.1	FXFR00000000	SAMEA3893509	VREN1980	Enterococcus faecium
GCA_900178655.1	FXEN00000000	SAMEA3893548	VREN2349	Enterococcus faecium
GCA_900179535.1	FXHT00000000	SAMEA3893515	VREN1455	Enterococcus faecium
GCA_900179325.1	FXHN00000000	SAMEA3893537	VREN1622	Enterococcus faecium
GCA_900178885.1	FXFM00000000	SAMEA3893531	VREN2301	Enterococcus faecium
GCA_900179065.1	FXGG00000000	SAMEA3893628	VREN3283	Enterococcus faecium
GCA_900179425.1	FXHV00000000	SAMEA3893662	VREN3645	Enterococcus faecium
GCA_900180135.1	FXKR00000000	SAMEA3894134	VREN1777	Enterococcus faecium
GCA_900179725.1	FXJC00000000	SAMEA3893483	VREN1844	Enterococcus faecium
GCA_900179795.1	FXIY00000000	SAMEA3893481	VREN1843	Enterococcus faecium
GCA_900178565.1	FXFK00000000	SAMEA3893619	VREN3204	Enterococcus faecium
GCA_900178935.1	FXFQ00000000	SAMEA3893582	VREN2831	Enterococcus faecium
GCA_900178915.1	FXFE00000000	SAMEA3893570	VREN2775	Enterococcus faecium
GCA_900180215.1	FXKV00000000	SAMEA3894146	VREN3650	Enterococcus faecium
GCA_900179555.1	FXIE00000000	SAMEA3893560	VREN1744	Enterococcus faecium
GCA_900180195.1	FXKN00000000	SAMEA3894143	VREN3282	Enterococcus faecium
GCA_900180175.1	FXKK00000000	SAMEA3894139	VREN2773	Enterococcus faecium
GCA_900179785.1	FXJM00000000	SAMEA3893498	VREN1874	Enterococcus faecium
GCA_900179465.1	FXGX00000000	SAMEA3893525	VREN1533	Enterococcus faecium
GCA_900179975.1	FXJT00000000	SAMEA3893496	VREN1873	Enterococcus faecium
GCA_900180075.1	FXKF00000000	SAMEA3893676	VREN3657	Enterococcus faecium
GCA_900179515.1	FXHW00000000	SAMEA3893639	VREN3305	Enterococcus faecium
GCA_900178745.1	FXFA00000000	SAMEA3893870	VREN2771	Enterococcus faecium
GCA_900178555.1	FXFB00000000	SAMEA3893571	VREN2776	Enterococcus faecium
GCA_900179695.1	FXIK00000000	SAMEA3893587	VREN1803	Enterococcus faecium
GCA_900179045.1	FXGB00000000	SAMEA3893875	VREN1840	Enterococcus faecium
GCA_900180205.1	FXKO00000000	SAMEA3894145	VREN3294	Enterococcus faecium
GCA_900179585.1	FXIH00000000	SAMEA3893564	VREN1773	Enterococcus faecium
GCA_900179655.1	FXIJ00000000	SAMEA3893581	VREN1799	Enterococcus faecium
GCA_900178945.1	FXFP00000000	SAMEA3893504	VREN1902	Enterococcus faecium
GCA_900179015.1	FXFS00000000	SAMEA3893523	VREN2173	Enterococcus faecium
GCA_900179575.1	FXIG00000000	SAMEA3893565	VREN1774	Enterococcus faecium
GCA_900179735.1	FXIV00000000	SAMEA3893719	VREN1837	Enterococcus faecium
GCA_900178635.1	FXFX00000000	SAMEA3893617	VREN3202	Enterococcus faecium
GCA_900178575.1	FXFN00000000	SAMEA3893541	VREN2307	Enterococcus faecium
GCA_900179355.1	FXHC00000000	SAMEA3893659	VREN3642	Enterococcus faecium
GCA_900179895.1	FXKA00000000	SAMEA3893596	VREN1809	Enterococcus faecium
GCA_900178895.1	FXFF00000000	SAMEA3893514	VREN2164	Enterococcus faecium
GCA_900179675.1	FXIN00000000	SAMEA3893578	VREN1782	Enterococcus faecium
GCA_900180095.1	FXKG00000000	SAMEA3893680	VREN3684	Enterococcus faecium
GCA_900179225.1	FXHM00000000	SAMEA3893521	VREN1530	Enterococcus faecium
GCA_900178725.1	FXFT00000000	SAMEA3893580	VREN2830	Enterococcus faecium
GCA_900179995.1	FXJP00000000	SAMEA3893667	VREN3649	Enterococcus faecium
GCA_900178755.1	FXEU00000000	SAMEA3893574	VREN2777	Enterococcus faecium
GCA_900178865.1	FXFU00000000	SAMEA3893526	VREN2299	Enterococcus faecium
GCA_900179815.1	FXJN00000000	SAMEA3893605	VREN1814	Enterococcus faecium
GCA_900179105.1	FXGJ00000000	SAMEA3893630	VREN3285	Enterococcus faecium
GCA_900178695.1	FXER00000000	SAMEA3893877	VREN2305	Enterococcus faecium
GCA_900180125.1	FXKJ00000000	SAMEA3894133	VREN1745	Enterococcus faecium
GCA_900178675.1	FXFG00000000	SAMEA3893876	VREN2170	Enterococcus faecium
GCA_900179525.1	FXGZ00000000	SAMEA3893558	VREN1743	Enterococcus faecium
GCA_900180255.1	FXKW00000000	SAMEA3894147	VREN3653	Enterococcus faecium
GCA_900179385.1	FXGU00000000	SAMEA3893633	VREN3290	Enterococcus faecium
GCA_900180005.1	FXJX00000000	SAMEA3893683	VREN3686	Enterococcus faecium
GCA_900180035.1	FXJU00000000	SAMEA3893494	VREN1872	Enterococcus faecium
GCA_900179945.1	FXJF00000000	SAMEA3893606	VREN1815	Enterococcus faecium
GCA_900178645.1	FXFL00000000	SAMEA3893618	VREN3203	Enterococcus faecium
GCA_900179395.1	FXHH00000000	SAMEA3893551	VREN1630	Enterococcus faecium
GCA_900179825.1	FXJI00000000	SAMEA3893607	VREN1834	Enterococcus faecium
GCA_900179135.1	FXGT00000000	SAMEA3893516	VREN1456	Enterococcus faecium
GCA_900180025.1	FXJJ00000000	SAMEA3893595	VREN1808	Enterococcus faecium
GCA_900179665.1	FXIP00000000	SAMEA3893579	VREN1798	Enterococcus faecium
GCA_900179775.1	FXIZ00000000	SAMEA3893486	VREN1845	Enterococcus faecium
GCA_900178995.1	FXGC00000000	SAMEA3893620	VREN3205	Enterococcus faecium
GCA_900179125.1	FXHX00000000	SAMEA3893524	VREN1532	Enterococcus faecium
GCA_900179495.1	FXHJ00000000	SAMEA3893544	VREN1626	Enterococcus faecium
GCA_900179715.1	FXIT00000000	SAMEA3893583	VREN1801	Enterococcus faecium
GCA_900180185.1	FXKP00000000	SAMEA3894144	VREN3288	Enterococcus faecium
GCA_900180165.1	FXKQ00000000	SAMEA3894136	VREN1870	Enterococcus faecium
GCA_900180225.1	FXKS00000000	SAMEA3894148	VREN3683	Enterococcus faecium
GCA_900179915.1	FXJE00000000	SAMEA3893684	VREN3734	Enterococcus faecium
GCA_900179215.1	FXHB00000000	SAMEA3893632	VREN3287	Enterococcus faecium
GCA_900178875.1	FXEW00000000	SAMEA3893920	VREN2657	Enterococcus faecium
GCA_900179545.1	FXID00000000	SAMEA3893513	VREN1454	Enterococcus faecium
GCA_900180155.1	FXKM00000000	SAMEA3894137	VREN2306	Enterococcus faecium
GCA_900178975.1	FXEQ00000000	SAMEA3893566	VREN2772	Enterococcus faecium
GCA_900179855.1	FXIX00000000	SAMEA3893597	VREN1810	Enterococcus faecium
GCA_900179145.1	FXHY00000000	SAMEA3893532	VREN1597	Enterococcus faecium
GCA_900179845.1	FXJO00000000	SAMEA3893476	VREN1841	Enterococcus faecium
GCA_900179365.1	FXHA00000000	SAMEA3893545	VREN1627	Enterococcus faecium
GCA_900178835.1	FXEY00000000	SAMEA3893559	VREN2724	Enterococcus faecium
GCA_900179455.1	FXHL00000000	SAMEA3893550	VREN1629	Enterococcus faecium
GCA_900179075.1	FXGM00000000	SAMEA3893627	VREN3280	Enterococcus faecium
GCA_900179935.1	FXIW00000000	SAMEA3893763	VREN3281	Enterococcus faecium
GCA_900179005.1	FXFO00000000	SAMEA3893894	VREN3652	Enterococcus faecium
GCA_900179035.1	FXGE00000000	SAMEA3893896	VREN3640	Enterococcus faecium
GCA_900179345.1	FXGP00000000	SAMEA3893522	VREN1531	Enterococcus faecium
GCA_900179835.1	FXJV00000000	SAMEA3893721	VREN1780	Enterococcus faecium
GCA_900179955.1	FXJQ00000000	SAMEA3893608	VREN1836	Enterococcus faecium
GCA_900178955.1	FXFV00000000	SAMEA3893500	VREN1900	Enterococcus faecium
GCA_900179115.1	FXGI00000000	SAMEA3893624	VREN3242	Enterococcus faecium
GCA_900180065.1	FXKD00000000	SAMEA3893673	VREN3656	Enterococcus faecium
GCA_900179175.1	FXGS00000000	SAMEA3893641	VREN3306	Enterococcus faecium
GCA_900179055.1	FXGL00000000	SAMEA3893622	VREN3240	Enterococcus faecium
GCA_900179685.1	FXIU00000000	SAMEA3893591	VREN1805	Enterococcus faecium
GCA_900179985.1	FXJK00000000	SAMEA3893478	VREN1842	Enterococcus faecium
GCA_900179205.1	FXHR00000000	SAMEA3893657	VREN3639	Enterococcus faecium
GCA_900179245.1	FXHQ00000000	SAMEA3893527	VREN1534	Enterococcus faecium
GCA_900178705.1	FXES00000000	SAMEA3893874	VREN1835	Enterococcus faecium
GCA_900179485.1	FXIC00000000	SAMEA3893539	VREN1623	Enterococcus faecium
GCA_900179025.1	FXGD00000000	SAMEA3893506	VREN1903	Enterococcus faecium
GCA_900178855.1	FXEJ00000000	SAMEA3893563	VREN2770	Enterococcus faecium
GCA_900179405.1	FXIA00000000	SAMEA3893507	VREN1373	Enterococcus faecium
GCA_900179165.1	FXGW00000000	SAMEA3893535	VREN1600	Enterococcus faecium
GCA_900178595.1	FXEO00000000	SAMEA3893575	VREN2778	Enterococcus faecium
GCA_900179265.1	FXHP00000000	SAMEA3893503	VREN1371	Enterococcus faecium
GCA_900179635.1	FXIO00000000	SAMEA3893572	VREN1778	Enterococcus faecium
GCA_900178985.1	FXGF00000000	SAMEA3893577	VREN2829	Enterococcus faecium
GCA_900179965.1	FXJR00000000	SAMEA3893603	VREN1813	Enterococcus faecium
GCA_900178925.1	FXFZ00000000	SAMEA3893549	VREN2653	Enterococcus faecium
GCA_900178765.1	FXEK00000000	SAMEA3893863	VREN3243	Enterococcus faecium
GCA_900179625.1	FXIM00000000	SAMEA3893576	VREN1781	Enterococcus faecium
GCA_900179875.1	FXJH00000000	SAMEA3893666	VREN3648	Enterococcus faecium
GCA_900180465.1	FXLR00000000	SAMEA3893631	VREN3286	Enterococcus faecium
GCA_900179765.1	FXJL00000000	SAMEA3893759	VREN3646	Enterococcus faecium
GCA_900179235.1	FXGN00000000	SAMEA3893534	VREN1598	Enterococcus faecium
GCA_900179315.1	FXGR00000000	SAMEA3893520	VREN1458	Enterococcus faecium
GCA_900180105.1	FXKH00000000	SAMEA3893681	VREN3685	Enterococcus faecium
GCA_900180055.1	FXKB00000000	SAMEA3893671	VREN3655	Enterococcus faecium
GCA_900179275.1	FXHO00000000	SAMEA3893660	VREN3644	Enterococcus faecium
GCA_900180085.1	FXKE00000000	SAMEA3893678	VREN3682	Enterococcus faecium
GCA_900179595.1	FXII00000000	SAMEA3893567	VREN1775	Enterococcus faecium
GCA_900179285.1	FXHF00000000	SAMEA3893555	VREN1741	Enterococcus faecium
GCA_900180045.1	FXJW00000000	SAMEA3893611	VREN1838	Enterococcus faecium
GCA_900179615.1	FXIQ00000000	SAMEA3893573	VREN1779	Enterococcus faecium
GCA_900180455.1	FXLS00000000	SAMEA3893592	VREN1806	Enterococcus faecium
GCA_900179415.1	FXHD00000000	SAMEA3893542	VREN1625	Enterococcus faecium
GCA_900180145.1	FXKL00000000	SAMEA3894135	VREN1800	Enterococcus faecium
GCA_900178825.1	FXFY00000000	SAMEA3893528	VREN2300	Enterococcus faecium
GCA_900178625.1	FXET00000000	SAMEA3893621	VREN3239	Enterococcus faecium
GCA_900178715.1	FXGA00000000	SAMEA3893554	VREN2655	Enterococcus faecium
GCA_900179645.1	FXIL00000000	SAMEA3893585	VREN1802	Enterococcus faecium
GCA_900179155.1	FXIB00000000	SAMEA3893508	VREN1374	Enterococcus faecium
GCA_900178685.1	FXFD00000000	SAMEA3893586	VREN2833	Enterococcus faecium
GCA_900179185.1	FXHK00000000	SAMEA3893547	VREN1628	Enterococcus faecium
GCA_900178785.1	FXEZ00000000	SAMEA3893557	VREN2656	Enterococcus faecium
GCA_900179745.1	FXJG00000000	SAMEA3893601	VREN1812	Enterococcus faecium
GCA_900179335.1	FXHZ00000000	SAMEA3893556	VREN1742	Enterococcus faecium
GCA_900180015.1	FXJY00000000	SAMEA3893488	VREN1846	Enterococcus faecium
GCA_900179195.1	FXHE00000000	SAMEA3893540	VREN1624	Enterococcus faecium
GCA_900178775.1	FXEX00000000	SAMEA3893519	VREN2167	Enterococcus faecium
GCA_900179565.1	FXIF00000000	SAMEA3893562	VREN1772	Enterococcus faecium
GCA_900179705.1	FXIS00000000	SAMEA3893589	VREN1804	Enterococcus faecium
GCA_900179095.1	FXGK00000000	SAMEA3893629	VREN3284	Enterococcus faecium
GCA_900178735.1	FXFC00000000	SAMEA3893502	VREN1901	Enterococcus faecium
GCA_900178905.1	FXFH00000000	SAMEA3893569	VREN2774	Enterococcus faecium
GCA_900179375.1	FXGV00000000	SAMEA3893511	VREN1375	Enterococcus faecium
GCA_900179885.1	FXJS00000000	SAMEA3893760	VREN3654	Enterococcus faecium
GCA_900179605.1	FXIR00000000	SAMEA3893568	VREN1776	Enterococcus faecium

SRA Data Details

Parameter	Value
Data volume, Gbases	310
Data volume, Tbytes	0.11

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