See
Genome Information for Arabidopsis thaliana
Using whole genome bisulfite sequencing to provide single-base resulution of DNA methylation status in 35S-SUC WT, hdp1-1 and hdp2-1, mbd7, idm1, and hdp2mbd7 double mutants
Overall design: 6 samples examined: 35S-SUC2 WT, hdp1-1, hdp2-1, mbd7, idm1, and hdp2mbd7 double mutants ( all with 35S-SUC2 transgene)
| Accession | PRJNA336041; GEO: GSE85060 |
| Data Type | Epigenomics |
| Scope | Multiisolate |
| Organism | Arabidopsis thaliana[Taxonomy ID: 3702] Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana |
| Publications | Duan CG et al., "A pair of transposon-derived proteins function in a histone acetyltransferase complex for active DNA demethylation.", Cell Res, 2017 Feb;27(2):226-240 |
| Submission | Registration date: 1-Aug-2016
Department of Horticulture and Landscape Architecture, Purdue University |
| NCBI Links | |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 6 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 6 |
| GEO DataSets | 1 |