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Accession: PRJNA335762 ID: 335762

Homo sapiens (human)

Microarray of CHD1 Knockdown in PC3 cells and CHD1 knockout in LNCaP cells

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We used microarrays to study the global gene expression and identified differentially expressed genes in CHD1 knockdown PC-3 cells and CHD1 KO LNCaP cells, aiming to identify genes and pathways that are regulated by CHD1 Overall design: 2 independent shRNAs for CHD1 and 1 control shRNA were used in PC3 cells. More...
AccessionPRJNA335762; GEO: GSE84970
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsZhao D et al., "Synthetic essentiality of chromatin remodelling factor CHD1 in PTEN-deficient cancer.", Nature, 2017 Feb 23;542(7642):484-488
SubmissionRegistration date: 28-Jul-2016
Md anderson cancer center
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Publications
PubMed1
PMC1
Other datasets
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Spots820125
Data volume, Processed Mbytes18
Data volume, Supplementary Mbytes64

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