Proof-of-concept for a massively parallel single-cell version of the Hi-C protocol
Overall design: Single-cell Hi-C
Raw data for GSM2254215, GSM2254216, GSM2254218, GSM2254219 and GSM2438426 were submitted to dbGaP due to patient privacy concerns. The raw data are available at dbGaP accession ID phs001269.v1.p1.
| Accession | PRJNA335638; GEO: GSE84920 |
| Scope | Multispecies |
| Publications | Ramani V et al., "Massively multiplex single-cell Hi-C.", Nat Methods, 2017 Mar;14(3):263-266 |
| Grants | - "University of Washington Center for Nuclear Organization and Function" (Grant ID U54 DK107979, National Institute of Diabetes and Digestive and Kidney Diseases)
- "Massively parallel contiguity mapping: Massively Parallel Contiguity Mapping: Massively parallel contiguity mapping: Massively parallel contiguity mapping: Massively Parallel Contiguity Mapping: Massively Parallel Contiguity Mapping" (Grant ID R01 HG006283, National Human Genome Research Institute)
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| Submission | Registration date: 27-Jul-2016
Shendure Lab, Genome Sciences, University of Washington |
| Relevance | Unknown |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 1 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 6 |
| GEO DataSets | 1 |