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Genome Information for Bos taurus
The Salzberg lab at the University of Maryland assembled the Bos taurus genome, using the genomic sequence generated by Baylor College of Medicine in BioProject PRJNA12555
| Accession | PRJNA32899 |
| Data Type | Genome sequencing and assembly |
| Scope | Monoisolate |
| Organism | Bos taurus[Taxonomy ID: 9913] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos; Bos taurus |
| Publications (total 7) Less... | - Merchant S et al., "Unexpected cross-species contamination in genome sequencing projects.", PeerJ, 2014 Nov 20;2:e675
- Zimin AV et al., "A whole-genome assembly of the domestic cow, Bos taurus.", Genome Biol, 2009 Apr 24;10(4):R42
- Kojima T et al., "Rapid communication: nucleotide sequence of the bovine elongation factor 1 alpha cDNA1.", J Anim Sci, 2002 Jun;80(6):1696-7
- Lowe TM et al., "tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.", Nucleic Acids Res, 1997 Mar 1;25(5):955-64
- Van Eynde A et al., "Molecular cloning of NIPP-1, a nuclear inhibitor of protein phosphatase-1, reveals homology with polypeptides involved in RNA processing.", J Biol Chem, 1995 Nov 24;270(47):28068-74
- Zhang G et al., "Identification of a novel class of mammalian Fc gamma receptor.", J Immunol, 1995 Aug 1;155(3):1534-41
- Ishiguro N et al., "A spontaneous internal deletion of the c-myb protooncogene enhances transcriptional activation in bovine T lymphoma cells.", J Biol Chem, 1994 Oct 28;269(43):26822-9
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| Submission | Registration date: 24-Apr-2009
Center for Bioinformatics and Computational Biology, University of Maryland |
| Locus Tag Prefix | BOS |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 6367 |
| WGS master | 1 |
| Protein Sequences | 21299 |
| Publications |
| PubMed | 7 |
| PMC | 3 |
| Other datasets |
| BioSample | 1 |
| Assembly | 1 |
Related RefSeq Project
PRJNA33843 : RefSeq annotation of the UMD Bos_taurus 3.1 assembly.
Related Project Category: Primary Data
PRJNA12555 : Bovine genome assembly by Cattle Genome Sequencing International Consortium