Chlamydia trachomatis strain:E and F strains (ID 316787) - BioProject

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Accession: PRJNA316787 ID: 316787

Chlamydia trachomatis strain:E and F strains

Re-sequencing of Chlamydia trachomatis E and F strains

See Genome Information for Chlamydia trachomatis

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171 additional projects are related by organism.

Chlamydia trachomatis, agent of ocular, urogenital and lymph system infections in humans, is highly abundant and within its serovars E, F and D are the most successful ones, causing sexually transmitted disease. More...

Accession	PRJNA316787
Data Type	Raw sequence reads, Genome sequencing
Scope	Multiisolate
Organism	Chlamydia trachomatis[Taxonomy ID: 813] Bacteria; Chlamydiota; Chlamydiia; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia; Chlamydia trachomatis
Publications	Published online: Eder T et al., "Genome sequencing ofChlamydia trachomatisserovars E and F reveals substantial genetic variation", Pathogens and Disease, 2017;75(9)
Submission	Registration date: 3-Jun-2016 CHI: Chlamydien-Wirtszell-Interaktion - University of Vienna
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (Genomic DNA)	14
SRA Experiments	7
Protein Sequences	6392
Other datasets
BioSample	7
Assembly	7

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

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7
7

Assembly	Chrs	BioSample	Strain	Taxonomy
GCA_001655575.1	2	SAMN04590091	F-6068	Chlamydia trachomatis
GCA_001655535.1	2	SAMN04590089	E-DK-20	Chlamydia trachomatis
GCA_001655495.1	2	SAMN04590087	E-32931	Chlamydia trachomatis
GCA_001655455.1	2	SAMN04590085	E-8873	Chlamydia trachomatis
GCA_001655415.1	2	SAMN04590083	E-547	Chlamydia trachomatis
GCA_001655375.1	2	SAMN04590080	E-160	Chlamydia trachomatis
GCA_001655335.1	2	SAMN04590078	E-103	Chlamydia trachomatis

SRA Data Details

Parameter	Value
Data volume, Gbases	5
Data volume, Mbytes	2058

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Chlamydia trachomatis strain:E and F strains

Re-sequencing of Chlamydia trachomatis E and F strains

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