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Accession: PRJNA31467 ID: 31467

Escherichia coli 83972

Reference genome for the Human Microbiome Project

See Genome Information for Escherichia coli
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This project is a component of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP)
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7503 additional projects are related by organism.
2947 additional projects are components of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP).

Escherichia coli 83972. This strain will be sequenced for comparative genome analysis.

AccessionPRJNA31467
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismEscherichia coli 83972[Taxonomy ID: 525281]
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli 83972
SubmissionRegistration date: 18-Feb-2009
- Baylor College of Medicine
- Baylor College of Medicine, Human Genome Sequencing Center, USA, Houston
Locus Tag PrefixHMPREF0358
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)265
WGS master1
SRA Experiments4
Protein Sequences5255
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSBioSampleTaxonomy
GCA_000159295.1ScaffoldACGN00000000SAMN00001495
Escherichia coli 83972
SRA Data Details
ParameterValue
Data volume, Mbases166
Data volume, Mbytes405

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