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Accession: PRJNA308314 ID: 308314

Quercus lobata isolate:SW786

Quercus lobata isolate:SW786 Genome sequencing and assembly

See Genome Information for Quercus lobata
The goal of this project is to use state-of-the art whole-genome sequencing and assembly approaches to provide a complete, high-quality sequence of the valley oak (Quercus lobata) genome with structural and functional annotations of genic regions and repetitive elements. More...
AccessionPRJNA308314
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismQuercus lobata[Taxonomy ID: 97700]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus; Quercus lobata
PublicationsSork VL et al., "First Draft Assembly and Annotation of the Genome of a California Endemic Oak Quercus lobata Née (Fagaceae).", G3 (Bethesda), 2016 Nov 8;6(11):3485-3495
SubmissionRegistration date: 28-Apr-2016
University of Maryland Center for Environmental Science
Related Resources
RelevanceEvolution
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)14
WGS master1
SRA Experiments13
Publications
PubMed1
PMC1
Other datasets
BioSample4
Assembly1
SRA Data Details
ParameterValue
Data volume, Gbases226
Data volume, Tbytes0.13

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