A targeted gene study of pathologic flora in the sputum of CF patients.
The sputum sample from patients with cystic fibrosis was analyzed by 16S rRNA gene amplification then direct pyrosequencing and compared to results obtained by the sequence of 36 clones by the Sanger method.
454 sequence data is available from the Short Read Archive (SRA): SRA001099.
| Accession | PRJNA30527 |
| Data Type | Targeted Locus (Loci) |
| Scope | Multiisolate |
| Organism | uncultured bacterium[Taxonomy ID: 77133] Bacteria; environmental samples; uncultured bacterium |
| Publications | Armougom F et al., "Use of pyrosequencing and DNA barcodes to monitor variations in Firmicutes and Bacteroidetes communities in the gut microbiota of obese humans.", BMC Genomics, 2008 Dec 1;9:576 |
| Submission | Registration date: 26-Jun-2008
Universite de la Mediterranee |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 3 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 2 |