mouse skin metagenome (ID 30121) - BioProject

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Accession: PRJNA30121 ID: 30121

mouse skin metagenome

Mouse skin microbiota pilot 1

The skin is a barrier critical for survival, preventing the escape of moisture and invasion by infectious or toxic substances. More...

Accession	PRJNA30121
Data Type	Targeted Locus (Loci)
Scope	Environment
Organism	mouse skin metagenome[Taxonomy ID: 540485] unclassified sequences; metagenomes; organismal metagenomes; mouse skin metagenome
Publications (total 4) Less...	Kobayashi T et al., "Dysbiosis and Staphylococcus aureus Colonization Drives Inflammation in Atopic Dermatitis.", Immunity, 2015 Apr 21;42(4):756-66 More... Kobayashi T et al., "Dysbiosis and Staphylococcus aureus Colonization Drives Inflammation in Atopic Dermatitis.", Immunity, 2015 Apr 21;42(4):756-66 Grice EA et al., "Longitudinal shift in diabetic wound microbiota correlates with prolonged skin defense response.", Proc Natl Acad Sci U S A, 2010 Aug 17;107(33):14799-804 Scharschmidt TC et al., "Matriptase-deficient mice exhibit ichthyotic skin with a selective shift in skin microbiota.", J Invest Dermatol, 2009 Oct;129(10):2435-42 Grice EA et al., "A diversity profile of the human skin microbiota.", Genome Res, 2008 Jul;18(7):1043-50 Less...
Submission	Registration date: 10-Jun-2008 - National Human Genome Research Institute (NHGRI) - National Intramural Sequencing Center
NCBI Links	BLAST Metagenomics Book BLAST against environmental sequences
Locus Tag Prefix	MES

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (Genomic DNA)	44286
SRA Experiments	225
Capillary Traces (Trace Archive)	1
Publications
PubMed	4
PMC	4
Other datasets
BioSample	226
PopSet	1

SRA Data Details

Parameter	Value
Data volume, Gbases	1
Data volume, Mbytes	2953

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Metagenomics Book
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Mouse skin microbiota pilot 1

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