Acidovorax ebreus TPSY (ID 29975) - BioProject

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Accession: PRJNA29975 ID: 29975

Acidovorax ebreus TPSY

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3 additional projects are related by organism.

Acidovorax ebreus TPSY. Acidovorax ebreus sp. TPSY may be important for the remediation of uranium in contaminated environments.

Accession	PRJNA29975
Data Type	Genome sequencing
Scope	Monoisolate
Organism	Acidovorax ebreus TPSY[Taxonomy ID: 535289] Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax; Acidovorax ebreus; Acidovorax ebreus TPSY
Publications	Byrne-Bailey KG et al., "Completed genome sequence of the anaerobic iron-oxidizing bacterium Acidovorax ebreus strain TPSY.", J Bacteriol, 2010 Mar;192(5):1475-6
Submission	Registration date: 27-Jan-2009 US DOE Joint Genome Institute (JGI-PGF) - JGI-PGF - DOE Joint Genome Institute
Locus Tag Prefix	DTPSY

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (Genomic DNA)	1
SRA Experiments	5
Capillary Traces (Trace Archive)	1
Protein Sequences	3479
Publications
PubMed	1
PMC	1
Other datasets
BioSample	2
Assembly	1

Assembly	Level	Chrs	BioSample	Taxonomy
GCA_000022305.1	Complete genome	1	SAMN00001444	Acidovorax ebreus TPSY

Parameter	Value
Data volume, Mbases	150
Data volume, Mbytes	1422

Supplemental Content

GOLD: Gp0001915 [Genomes On Line Database]
GOLD: Gp0001915
Genomes On Line Database
643348541: Acidovorax ebreus TPSY [Integrated Microbial Genomes]
643348541: Acidovorax ebreus TPSY
Integrated Microbial Genomes
RDP Identifier: 29975 [Ribosomal Database Project II]
RDP Identifier: 29975
Ribosomal Database Project II
SILVA LSU Database [SILVA]
SILVA LSU Database
SILVA
SILVA SSU Database [SILVA]
SILVA SSU Database
SILVA

RNA-seq on Hesx1+/+ and Hesx1-/- ES cells deprived of 2i/LIF for 24 hours
RNA-seq on Hesx1+/+ and Hesx1-/- ES cells deprived of 2i/LIF for 24 hours
RNA-seq on Hesx1+/+ and Hesx1-/- ES cells deprived of 2i/LIF for 24 hours

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Acidovorax ebreus TPSY
Acidovorax ebreus TPSY
Uranium-oxidizing bacterium

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LR11 knockout in BAT and WAT

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Anabaena sp. 90 strain:90
Microcystin-producing cyanobacterium

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