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Accession: PRJNA292866 ID: 292866

Bos taurus (cattle)

MIRA-Seq analysis of bovine dermal fibroblasts isolated from two breeds of cattle, Holstein (dairy breed) and Angus (beef breed).

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This project is a component of the Differential responsiveness of Holstein and Angus dermal fibroblasts to LPS challenge occurs without major differences in the methylome.
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1 additional project is a component of the Differential responsiveness of Holstein and Angus dermal fibroblasts to LPS challenge occurs without major differences in the methylome..
1336 additional projects are related by organism.
We report the results of MIRA-Seq based high-throughput profiling of the bovine dermal fibroblast methylome from two different breeds of cattle (n=4/breed) to determine the breed-dependent differences in methylation. More...
AccessionPRJNA292866; GEO: GSE72071
Data TypeEpigenomics
ScopeMultiisolate
OrganismBos taurus[Taxonomy ID: 9913]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos; Bos taurus
PublicationsBenjamin AL et al., "Differential responsiveness of Holstein and Angus dermal fibroblasts to LPS challenge occurs without major differences in the methylome.", BMC Genomics, 2016 Mar 24;17:258
SubmissionRegistration date: 14-Aug-2015
Animal and Veterinary Sciences, University of Vermont
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments8
Publications
PubMed1
PMC1
Other datasets
BioSample8
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes76
SRA Data Details
ParameterValue
Data volume, Gbases36
Data volume, Mbytes24595

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