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Accession: PRJNA292784 ID: 292784

Saccharomyces cerevisiae (baker's yeast)

Genome-wide expression analysis of yeast with CRISPR-mediated inhibition of GAL10 ncRNA compared to wild-type.

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We analyzed the genome-wide expression by RNA-seq of a yeast strain that expresses Cas9d and a guideRNA targeted to the GAL10 locus (called +116), which inhibits GAL10 ncRNA expression from the antisense strand. More...
AccessionPRJNA292784; GEO: GSE72032
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismSaccharomyces cerevisiae[Taxonomy ID: 4932]
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae
PublicationsLenstra TL et al., "Single-Molecule Imaging Reveals a Switch between Spurious and Functional ncRNA Transcription.", Mol Cell, 2015 Nov 19;60(4):597-610
SubmissionRegistration date: 13-Aug-2015
Systems Biology of Gene Expression, Laboratory of Receptor Biology and Gene Expression, National Cancer Institute, Center for Cancer Research
RelevanceModel Organism
Project Data:
Resource NameNumber
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Sequence data
SRA Experiments4
Publications
PubMed1
PMC1
Other datasets
BioSample4
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases47
Data volume, Mbytes15534

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