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Accession: PRJNA292648 ID: 292648

St. Jude Center of Excellence for Influenza Research and Surveillance (SJCEIRS)

The St. Jude CEIRS (SJCEIRS) continues to support an international influenza surveillance network focused on wild birds and domestic animals that includes sites in the U.S., Canada, Bangladesh, China, Colombia, and Egypt. St. Jude researchers are particularly interested in understanding how some avian flu viruses jump from infecting birds to infecting humans and other mammals while others do not. In addition to surveillance, researchers are studying the human immune response to influenza, risk factors associated with influenza complications, transmission of influenza, and others. The CEIRS contract also supports St. Jude’s ongoing role in developing influenza vaccine seed stock that can be used to ramp up production of new influenza vaccines.
AccessionPRJNA292648
TypeUmbrella project (Subtype:Disease)
Grants
  • "NIAID Centers of Excellence for Influenza Research and Surveillance" (Grant ID HHSN272201400006C, National Institutes of Allergy and Infectious Diseases)
SubmissionRegistration date: 12-Aug-2015
NIAID Centers of Excellence for Influenza Research and Surveillance
Related Resources
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (Genomic RNA)13535
SRA Experiments1
Protein Sequences20072
Publications
PubMed3
PMC3
Other datasets
BioSample1
SRA Data Details
ParameterValue
Data volume, Mbases10
Data volume, Mbytes2
This project encompasses the following 16 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
SRA or Trace
No data links
Total

1
13
14
BioProject
accession
Assembly
level
NameTitle
PRJNA295609 No data linksInfluenza ASurveillance in Colombia (CEIRS Data Processing and...)
PRJNA298521 No data linksInfluenza A VirusNatural History of Influenza A viruses in Wild Bird Populations - Understanding reservoirs and risks (NIAID Centers of Excellence...)
PRJNA293442 SRA or TraceInfluenza A virusInfluenza A virus Genome sequencing (NIAID Centers of Excellence...)
PRJNA297868 No data linksInfluenza A virusWild Birds in the Americas (NIAID Centers of Excellence...)
PRJNA298519 No data linksInfluenza A virusAvian influenza at the human-animal interface in Bangladesh (NIAID Centers of Excellence...)
List all 14 'Genome sequencing' projects...
metagenomic assembly1
BioProject
accession
OrganismTitle
PRJNA298520Influenza A virusAntiviral Studies (NIAID Centers of Excellence...)
phenotype or genotype1
BioProject
accession
OrganismTitle
PRJNA295564Influenza A virusPrevalence of Influenza Virus in High Risk Populations in Colombia (NIAID Centers of Excellence...)

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