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Accession: PRJNA292567 ID: 292567

Zea mays

Dosage effect on small RNA transcripts in maize copy number alterations

See Genome Information for Zea mays
We sequenced 10 small RNA samples. 6 samples were taken from the 14-day old maize seedling tissue, and the other 4 samples were taken from 14-day old maize root tissue. Overall design: Examination of small RNA levels in each individual sample
AccessionPRJNA292567; GEO: GSE71959
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismZea mays[Taxonomy ID: 4577]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea; Zea mays
PublicationsZuo T et al., "Genes and Small RNA Transcripts Exhibit Dosage-Dependent Expression Pattern in Maize Copy-Number Alterations.", Genetics, 2016 Jul;203(3):1133-47
SubmissionRegistration date: 11-Aug-2015
Genetics, Development and Cell Biology, Iowa state University
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments10
Publications
PubMed1
PMC1
Other datasets
BioSample10
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases8
Data volume, Mbytes6008

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