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Accession: PRJNA292325 ID: 292325

Brassica napus (rape)

Tissue-specific laser microdissection of the Brassica napus funiculus improves gene identification and spatial control of biological processes

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Tissue-specific RNA profiling of the Brassica napus funiculus and funicular subcompartments using laser microdissection and RNA-sequencing Overall design: Funiculi were collected seven days after fertilization, histologically processed, and and embedded in paraffin. More...
AccessionPRJNA292325; GEO: GSE71859
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismBrassica napus[Taxonomy ID: 3708]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus
PublicationsChan AC et al., "Tissue-specific laser microdissection of the Brassica napus funiculus improves gene discovery and spatial identification of biological processes.", J Exp Bot, 2016 May;67(11):3561-71
SubmissionRegistration date: 7-Aug-2015
Belmonte, Biological Sciences, University of Manitoba
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments11
Publications
PubMed1
PMC1
Other datasets
BioSample11
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes3
SRA Data Details
ParameterValue
Data volume, Gbases9
Data volume, Mbytes5881

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