Homo sapiens (ID 292118) - BioProject

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Accession: PRJNA292118 ID: 292118

Homo sapiens (human)

Next Generation Sequencing Transcriptomes of breast cancer

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We performed high throughput transcriptome of breast cancer and normal tissues, identifying lincRNA associated molecular subtype with powerful capacity to distinct breast cancer population and predict prognosis. More...

Accession	PRJNA292118; GEO: GSE71651
Data Type	Transcriptome or Gene expression
Scope	Multiisolate
Organism	Homo sapiens[Taxonomy ID: 9606] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
Publications (total 5) Less...	Pang B et al., "Landscape of tumor suppressor long noncoding RNAs in breast cancer.", J Exp Clin Cancer Res, 2019 Feb 14;38(1):79 More... Pang B et al., "Landscape of tumor suppressor long noncoding RNAs in breast cancer.", J Exp Clin Cancer Res, 2019 Feb 14;38(1):79 Xu S et al., "The MS-lincRNA landscape reveals a novel lincRNA BCLIN25 that contributes to tumorigenesis by upregulating ERBB2 expression via epigenetic modification and RNA-RNA interactions in breast cancer.", Cell Death Dis, 2019 Dec 4;10(12):920 Zhang J et al., "The transcriptional landscape of lncRNAs reveals the oncogenic function of LINC00511 in ER-negative breast cancer.", Cell Death Dis, 2019 Aug 8;10(8):599 Xu S et al., "Ai-lncRNA EGOT enhancing autophagy sensitizes paclitaxel cytotoxicity via upregulation of ITPR1 expression by RNA-RNA and RNA-protein interactions in human cancer.", Mol Cancer, 2019 Apr 18;18(1):89 Xu S et al., "Oncogenic long noncoding RNA landscape in breast cancer.", Mol Cancer, 2017 Jul 24;16(1):129 Less...
Submission	Registration date: 3-Aug-2015 Department of Breast Surgery, Harbin Medical University Cancer Hospital
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
SRA Experiments	33
Publications
PubMed	5
PMC	5
Other datasets
BioSample	33
GEO DataSets	1

GEO Data Details

Parameter	Value
Data volume, Supplementary Mbytes	43

SRA Data Details

Parameter	Value
Data volume, Gbases	399
Data volume, Tbytes	0.18

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Next Generation Sequencing Transcriptomes of breast cancer

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