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Accession: PRJNA291979 ID: 291979

Homo sapiens (human)

Inhibitors of the histone lysine demethylase KDM1A are broadly efficacious in AML by evicting the enzyme from chromatin [ChIP-Seq]

See Genome Information for Homo sapiens
Examine the distribution of KDM1A and the histone H3K4me2 mark on chromatin following treatment with two distinct classes of KDM1A inhibitors - an irreversible inhibitor (RN-1) and a reversible inhibitor (GSK690) Overall design: 15 samples total from two treated cell lines - 9 from Kasumi-1 and 6 from SKNO-1. Controls included were input DNA isolated from the treated cells.
AccessionPRJNA291979; GEO: GSE71739
Data TypeEpigenomics
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsMcGrath JP et al., "Pharmacological Inhibition of the Histone Lysine Demethylase KDM1A Suppresses the Growth of Multiple Acute Myeloid Leukemia Subtypes.", Cancer Res, 2016 Apr 1;76(7):1975-88
SubmissionRegistration date: 5-Aug-2015
Constellation Pharmaceuticals
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments15
Publications
PubMed1
Other datasets
BioSample15
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes10180
SRA Data Details
ParameterValue
Data volume, Gbases47
Data volume, Mbytes30556

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