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Accession: PRJDB3373 ID: 291832

soil metagenome

Microbial genome analysis of tsunami-affected soil

The 2011 Great East Japan Earthquake Tsunami changed terrestrial environment. More...
AccessionPRJDB3373
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismsoil metagenome[Taxonomy ID: 410658]
unclassified sequences; metagenomes; ecological metagenomes; soil metagenome
PublicationsHiraoka S et al., "Genomic and metagenomic analysis of microbes in a soil environment affected by the 2011 Great East Japan Earthquake tsunami.", BMC Genomics, 2016 Jan 14;17:53
SubmissionRegistration date: 4-Aug-2015
Department of Computational Biology, Graduate School of Frontier Sciences, The University of Tokyo
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)1737
WGS master2
Genomic DNA4
SRA Experiments4
Protein Sequences20301
Publications
PubMed1
PMC1
Other datasets
BioSample6
Assembly4
Assembly details:
SRA Data Details
ParameterValue
Data volume, Gbases2
Data volume, Mbytes5787

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