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Accession: PRJNA291775 ID: 291775

Arabidopsis thaliana (thale cress)

Dicer-independent RNA-directed DNA methylation in Arabidopsis [small RNA-seq 2]

See Genome Information for Arabidopsis thaliana
Using small RNA-Seq(sRNA-Seq) to get small RNA profiling of dcl2/3/4/nrpd1 and nrpd1 mutants Overall design: 2 samples examined, dcl2/3/4/nrpd1 and nrpd1
AccessionPRJNA291775; GEO: GSE71672
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismArabidopsis thaliana[Taxonomy ID: 3702]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana
PublicationsYang DL et al., "Dicer-independent RNA-directed DNA methylation in Arabidopsis.", Cell Res, 2016 Jan;26(1):66-82
SubmissionRegistration date: 3-Aug-2015
Department of Horticulture and Landscape Architecture, Purdue University
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RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments2
Publications
PubMed1
PMC1
Other datasets
BioSample2
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes3
SRA Data Details
ParameterValue
Data volume, Gbases10
Data volume, Mbytes4131

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