This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA291417; GEO: GSE71514 |
| Type | Umbrella project |
| Publications | Mathur R et al., "ARID1A loss impairs enhancer-mediated gene regulation and drives colon cancer in mice.", Nat Genet, 2017 Feb;49(2):296-302 |
| Submission | Registration date: 29-Jul-2015
Center for Biomedical Informatics, Harvard Medical School |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 34 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 34 |
| GEO DataSets | 5 |
ARID1A loss impairs enhancer-mediated gene regulation and drives colon cancer in mice encompasses the following 4 sub-projects:
| Project Type | Number of Projects |
| Epigenomics | 2 |
BioProject
accession | Organism | Title |
|---|
| PRJNA291423 | Homo sapiens | ARID1A loss impairs enhancer-mediated gene regulation and drives colon cancer in mice [HCT116_ChIP-seq] (Center for Biomedical Informatics,...) | | PRJNA291421 | Mus musculus | ARID1A loss impairs enhancer-mediated gene regulation and drives colon cancer in mice [primary cells_ChIP-seq] (Center for Biomedical Informatics,...) |
|
| Transcriptome or Gene expression | 2 |
BioProject
accession | Organism | Title |
|---|
| PRJNA291422 | Homo sapiens | ARID1A loss impairs enhancer-mediated gene regulation and drives colon cancer in mice [HCT116_RNA-seq] (Center for Biomedical Informatics,...) | | PRJNA291420 | Mus musculus | ARID1A loss impairs enhancer-mediated gene regulation and drives colon cancer in mice [primary cells_RNA-seq] (Center for Biomedical Informatics,...) |
|