Sign in to NCBI

Display Settings:

Format

Send to:

Choose Destination
Accession: PRJNA291312 ID: 291312

Homo sapiens (human)

Methylome Analysis of Esophageal Squamous Cell Carcinoma by using Next Generation Sequencing

See Genome Information for Homo sapiens
Navigate Up
This project is a component of the Integrated analysis of methylome and transcriptome of Esophageal Squamous Cell Carcinoma by using Next Generation Sequencing
Navigate Across
1 additional project is a component of the Integrated analysis of methylome and transcriptome of Esophageal Squamous Cell Carcinoma by using Next Generation Sequencing.
66644 additional projects are related by organism.
We obtained methylome profiling (MeDIP-seq) of esophageal squamous cell carcinoma (ESCC) and normal tissue specimens by using next generation sequencing. Overall design: Comparison of DNA methylation pfofiles between ESCC and normal mucosa.
AccessionPRJNA291312; GEO: GSE71410
Data TypeEpigenomics
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsOtsubo T et al., "DNA hypermethyation and silencing of PITX1 correlated with advanced stage and poor postoperative prognosis of esophageal squamous cell carcinoma.", Oncotarget, 2017 Oct 13;8(48):84434-84448
SubmissionRegistration date: 28-Jul-2015
Axiohelix Co. Ltd.
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments2
Publications
PubMed1
PMC1
Other datasets
BioSample2
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes433
SRA Data Details
ParameterValue
Data volume, Gbases9
Data volume, Mbytes3638

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On
  • Homo sapiens
    Homo sapiens
    Methylome Analysis of Esophageal Squamous Cell Carcinoma by using Next Generation Sequencing
    BioProject
  • Solanum lycopersicoides
    Solanum lycopersicoides
    Solanum lycopersicoides Raw sequence reads
    BioProject
  • salt lake metagenome
    salt lake metagenome
    Sorted cell/s from Organic Lake upper layer water, Antarctica - Uncultured microbe JGI OrgLkO2.SYBR.01.M11 metagenome
    BioProject
  • Crassostrea gigas
    Crassostrea gigas
    Crassostrea gigas Transcriptome or Gene expression
    BioProject
  • Escherichia coli HS strain:HS
    Escherichia coli HS strain:HS
    Colonizes human gastrointestinal tract but does not cause disease
    BioProject

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI
Support Center