This project compiles Illumina poly(A+) RNA-Seq data of a short developmental series (sex-specific 1st-instar larva, 3rd-instar larva, mid-stage pupa, and 7-day adult) and dissected gonads and carcasses from multiple inbred lines of D. pseudoobscura, D. persimilis, and D. pseudoobscura bogotana.
| Accession | PRJNA291085 |
| Data Type | Raw sequence reads |
| Scope | Multispecies |
| Organism | Drosophila[Taxonomy ID: 7215] Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila |
| Publications | Nyberg KG et al., "Comparative Expression Dynamics of Intergenic Long Noncoding RNAs in the Genus Drosophila.", Genome Biol Evol, 2016 Jun 27;8(6):1839-58 |
| Grants | - "Evolutionary Genomics of Long Intergenic Non-coding RNAs (lincRNAs) in Drosophila" (Grant ID 1330766, National Science Foundation)
- "DISSERTATION RESEARCH: Divergence of long intergenic noncoding RNAs in Drosophila pseudoobscura, Drosophila persimilis, and their hybrids" (Grant ID 1405103, National Science Foundation)
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| Submission | Registration date: 27-Jul-2015
University of Maryland, College Park |
| Relevance | Evolution |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 38 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 13 |