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Accession: PRJDB3995 ID: 290872

Vibrio

Identification and characterization of a novel AHPND vibrio strain from Vietnam

A whole genome sequencing a vibrio strain isolated from acute hepatopancreas necrosis disease infected shrimp revealed that the strain is not Vibrio parahaemolyticus but a close species to V. harveyi or campbellii.
AccessionPRJDB3995
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismVibrio[Taxonomy ID: 662]
Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
PublicationsKondo H et al., "Draft Genome Sequence of Non-Vibrio parahaemolyticus Acute Hepatopancreatic Necrosis Disease Strain KC13.17.5, Isolated from Diseased Shrimp in Vietnam.", Genome Announc, 2015 Sep 17;3(5)
SubmissionRegistration date: 25-Jul-2015
Laboratory of Genome Science, Graduate School of Marine Science and Technology, Tokyo University of Marine Science and Technology
RelevanceAgricultural
Locus Tag PrefixAKQ11
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)95
WGS master1
SRA Experiments1
Publications
PubMed1
PMC1
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSBioSampleTaxonomy
GCA_001192695.1ScaffoldBBXN00000000SAMD00032033
Vibrio harveyi
SRA Data Details
ParameterValue
Data volume, Gbases2
Data volume, Mbytes1216

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