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Accession: PRJNA290865 ID: 290865

FDA NARMS

National Antimicrobial Resistance Monitoring System (NARMS)

Contains whole genome sequencing data acquired from bacterial isolates as part of NARMS, an interagency surveillance program that monitors antimicrobial resistance of foodborne pathogens.
AccessionPRJNA290865
TypeUmbrella project
SubmissionRegistration date: 24-Jul-2015
FDA
Related Resources
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)90008
WGS master57764
Genomic DNA577
SRA Experiments62245
Protein Sequences1496785
Publications
PubMed6
PMC3
Other datasets
BioSample62309
Assembly57953
SRA Data Details
ParameterValue
Data volume, Gbases19,557
Data volume, Tbytes11.34
FDA NARMS encompasses the following 17 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Complete genome
Contigs
No data links
Total

5
6
6
17
BioProject
accession
Assembly
level
NameTitle
PRJNA761673 No data linksCVM NARMS diversity expansion picks Genome sequencing and assemblyCVM NARMS diversity expansion picks Genome sequencing and assembly (FDA-CVM)
PRJNA292664 ContigsCampylobacterCVM NARMS Campylobacter (FDA)
PRJNA292668 ContigsCampylobacterFSIS NARMS Campylobacter (FDA)
PRJNA287430 ContigsCampylobacterUSDA-FSIS: Isolated strains of Campylobacter spp. genome sequencing (USDA FSIS)
PRJNA726956 No data linksCampylobacterCampylobacter Genome sequencing and assembly (NARMS Project: Thakur Molecular...)
List all 17 'Genome sequencing' projects...

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