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Accession: PRJNA290782 ID: 290782

Xiphophorus hellerii (green swordtail)

Xiphophorus hellerii Genome sequencing and assembly

See Genome Information for Xiphophorus hellerii
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4 additional projects are related by organism.
The sequence and assembly of Xiphophporus hellerii will allow investigations of interspecies hybrids, especially those of X. maculatus, to determine the genetics of underlying spontaneous and induced tumorigenesis.
AccessionPRJNA290782
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismXiphophorus hellerii[Taxonomy ID: 8084]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus; Xiphophorus hellerii
PublicationsBai JJ et al., "The complete mitochondrial genome of the RR-B strain of swordtail (Xiphophorus helleri).", Mitochondrial DNA, 2009 Aug;20(4):72-7
Grants
  • "ENHANCED DEVELOPMENT OF THE XIPHOPHORUS MODEL SYSTEM" (Grant ID R24 OD011120, National Institute of Health)
SubmissionRegistration date: 13-Nov-2015
- McDonnell Genome Institute - Washington University School of Medicine
- McDonnell Genome Institute - Washington University School of Medicine
Related Resources
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)51
WGS master2
SRA Experiments7
Publications
PubMed1
Other datasets
BioSample2
Assembly2
Supplementary data
BioNano map2
Assembly details:
SRA Data Details
ParameterValue
Data volume, Gbases193
Data volume, Mbytes95014
Related RefSeq Project
PRJNA604828 : Xiphophorus hellerii RefSeq Genome sequencing and assembly

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