See
Genome Information for Escherichia coli
Here we have developed a method that combines chromatin immunoprecipitation with next-generation sequencing (ChIP-Seq) and mathematical modeling to quantify RecA protein binding during the active repair of a single DSB in the chromosome of Escherichia coli.
Overall design: Examination of RecA binding during double-strand break repair in Escherichia coli
| Accession | PRJNA290706; GEO: GSE71249 |
| Data Type | Epigenomics |
| Scope | Multiisolate |
| Organism | Escherichia coli[Taxonomy ID: 562] Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli |
| Publications | Cockram CA et al., "Quantitative genomic analysis of RecA protein binding during DNA double-strand break repair reveals RecBCD action in vivo.", Proc Natl Acad Sci U S A, 2015 Aug 25;112(34):E4735-42 |
| Submission | Registration date: 23-Jul-2015
Leach Lab, ICB, University of Edinburgh |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
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| Sequence data |
| SRA Experiments | 9 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 9 |
| GEO DataSets | 1 |