Display Settings:

Format

Send to:

Choose Destination
Accession: PRJNA290519 ID: 290519

Bixa orellana isolate:Peruana Roja

Bixa orellana isolate:Peruana Roja Transcriptome or Gene expression

See Genome Information for Bixa orellana
Bixa orellana L., also known as achiote in Mexico, is a tropical perennial and ligneous plant of great agroindustrial interest due to its high content of bixin, an apocarotenoid located mainly in the seeds. More...
AccessionPRJNA290519
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismBixa orellana[Taxonomy ID: 66672]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Bixaceae; Bixa; Bixa orellana
PublicationsCárdenas-Conejo Y et al., "De novo transcriptome sequencing in Bixa orellana to identify genes involved in methylerythritol phosphate, carotenoid and bixin biosynthesis.", BMC Genomics, 2015 Oct 28;16:877
Grants
  • "A novel poplar biomass germplasm resource for functional genomics and breeding" (Grant ID DE-SC0007183, DOE Office of Science, Office of Biological and Environmental Research)
  • "Análisis de genes clave asociados a la variación en la producción de pigmentos en cultivos de importancia comercial a nivel nacional e internacional" (Grant ID CB-2008:98508, Consejo Nacional de Ciencia y Tecnología)
  • "Análisis del genoma y transcriptoma de achiote (Bixa orellana) para su mejoramiento genético y su exploración como alimento funcional" (Grant ID CB-2013:220259, Consejo Nacional de Ciencia y Tecnología)
SubmissionRegistration date: 21-Jul-2015
Centro de Investigacion Cientifica de Yucatan
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (TSA master)1
SRA Experiments1
Publications
PubMed1
PMC1
Other datasets
BioSample1
SRA Data Details
ParameterValue
Data volume, Gbases2
Data volume, Mbytes1138

Supplemental Content

Recent activity

  • Bixa orellana isolate:Peruana Roja
    Bixa orellana isolate:Peruana Roja
    Bixa orellana isolate:Peruana Roja Transcriptome or Gene expression
    BioProject
  • lake water metagenome
    lake water metagenome
    Green sulfur bacteria associated microbial communities from Trout Bog Lake, Wisconsin, USA - Chlorobi peak TB 19 metagenome
    BioProject
  • hot springs metagenome
    hot springs metagenome
    Enriched cells from Little Hot Creek sediment, California, USA - LHC4sed.1.2015 0410 MDM2 LHC4 sed p1 16S.J6.double-peak metagenome
    BioProject
  • marine metagenome
    marine metagenome
    Marine microbial communities from Saanich Inlet, British Columbia, Canada - FPPZ-9-H9 metagenome
    BioProject

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center