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Accession: PRJNA290502 ID: 290502

The splicing regulator PTBP1 controls the activity of the transcription factor Pbx1 during neuronal differentiation

This SuperSeries is composed of the SubSeries listed below. Overall design: Refer to individual Series
AccessionPRJNA290502; GEO: GSE71179
TypeUmbrella project
PublicationsLinares AJ et al., "The splicing regulator PTBP1 controls the activity of the transcription factor Pbx1 during neuronal differentiation.", Elife, 2015 Dec 24;4:e09268
SubmissionRegistration date: 21-Jul-2015
BLACK LAB, UCLA
RelevanceSuperseries
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments30
Publications
PubMed1
PMC1
Other datasets
BioSample30
GEO DataSets6
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes112
SRA Data Details
ParameterValue
Data volume, Gbases160
Data volume, Tbytes0.13
The splicing regulator PTBP1 controls the activity of the transcription factor Pbx1 during neuronal differentiation encompasses the following 5 sub-projects:
Project TypeNumber of Projects
Other4
BioProject
accession
OrganismTitle
PRJNA290505Mus musculusPtpb1 iCLIP in 46C mESCs and mNPCs (BLACK LAB, UCLA)
PRJNA290312Mus musculusSplicing analyses of 46C mESCs following PTBP depletion (BLACK LAB, UCLA)
PRJNA290074Mus musculusSplicing analyses of 46C mNPCs following PTBP depletion (BLACK LAB, UCLA)
PRJNA290316Mus musculusSplicing analyses of mESCs, mNPCs, and mMNs (BLACK LAB, UCLA)
Transcriptome or Gene expression1
BioProject
accession
OrganismTitle
PRJNA289755Mus musculusGene expression analyses of HB9-GFP D2 mMN cultures following Pbx1 exon 7 inclusion (BLACK LAB, UCLA)

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