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Accession: PRJNA290427 ID: 290427

Apodemus sylvaticus isolate:WM_1_Wirral (European woodmouse)

Apodemus sylvaticus isolate:WM_1_Wirral Genome sequencing and assembly

See Genome Information for Apodemus sylvaticus
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1 additional project is related by organism.
De novo assembly of the wood mouse (Apodemus sylvaticus) genome; produced as part of a study into the diversity and evolution of immune genes in wild rodents.
AccessionPRJNA290427
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismApodemus sylvaticus[Taxonomy ID: 10129]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Apodemus; Sylvaemus group; Apodemus sylvaticus
Grants
  • "Diversity and evolution of vertebrate immune system genes in the natural environment" (Grant ID NE/J007307/1, Natural Environment Research Council)
SubmissionRegistration date: 2-Oct-2015
University of Liverpool
RelevanceEvolution
Locus Tag PrefixAFK02
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)1
SRA Experiments3
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSBioSampleTaxonomy
GCA_001305905.1ScaffoldLIPJ00000000SAMN03863808
Apodemus sylvaticus
SRA Data Details
ParameterValue
Data volume, Gbases60
Data volume, Mbytes40953

Supplemental Content

Related information

LinkOut to external resources

  • GOLD: Gp0143296 [Genomes On Line Database]
    GOLD: Gp0143296
    Genomes On Line Database

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