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Accession: PRJNA290341 ID: 290341

Homo sapiens (human)

PAR-CLIP analysis of YTHDC1, SRSF1, SRSF3, SRSF7, SRSF9 and SRSF10 in human HeLa cells

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Label the cells overexpressed Flag tagged YTHDC1, SRSF1, SRSF3, SRSF7, SRSF9 and SRSF10 with 4-SU, the RNA bound by YTHDC1 and SRSF proteins can be got by Flag IP followed by RNA isolation by using the TRIzol (Invitrogen) reagent by following the company manual. More...
AccessionPRJNA290341; GEO: GSE71096
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsXiao W et al., "Nuclear m(6)A Reader YTHDC1 Regulates mRNA Splicing.", Mol Cell, 2016 Feb 18;61(4):507-519
SubmissionRegistration date: 20-Jul-2015
Beijing Institute of Genomics (BIG) of Chinese Academy of Sciences (CAS)
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments9
Publications
PubMed1
Other datasets
BioSample9
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes13
SRA Data Details
ParameterValue
Data volume, Gbases75
Data volume, Mbytes49437

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