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Accession: PRJNA290278 ID: 290278

Homo sapiens (human)

SK-N-SH Hi-C

See Genome Information for Homo sapiens
Hi-C was performed on SK-N-SH cells to study 3-dimensional chromatin architecture. Overall design: Two biological replicates were performed, each with roughly 25x10^7 cells.
AccessionPRJNA290278; GEO: GSE71072
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsGuo Y et al., "CRISPR Inversion of CTCF Sites Alters Genome Topology and Enhancer/Promoter Function.", Cell, 2015 Aug 13;162(4):900-10
SubmissionRegistration date: 18-Jul-2015
Bing Ren, Ludwig Institute for Cancer Research
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments2
Publications
PubMed1
PMC1
Other datasets
BioSample2
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases86
Data volume, Mbytes56801

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