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Accession: PRJNA289906 ID: 289906

Arabidopsis thaliana (thale cress)

Dicer-independent RNA-directed DNA methylation in Arabidopsis [small RNA-seq 1]

See Genome Information for Arabidopsis thaliana
Using small RNA-Seq(sRNA-Seq) to get small RNA profiling of dcl2/3/4, dcl1/2/3/4 and WT Overall design: 3 samples examined, WT, dcl2/3/4 and dcl1/2/3/4
AccessionPRJNA289906; GEO: GSE70913
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismArabidopsis thaliana[Taxonomy ID: 3702]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana
PublicationsYang DL et al., "Dicer-independent RNA-directed DNA methylation in Arabidopsis.", Cell Res, 2016 Jan;26(1):66-82
SubmissionRegistration date: 14-Jul-2015
Department of Horticulture and Landscape Architecture, Purdue University
NCBI Links
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments3
Publications
PubMed1
PMC1
Other datasets
BioSample3
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes9
SRA Data Details
ParameterValue
Data volume, Gbases4
Data volume, Mbytes2550

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