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Genome Information for Mus musculus
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3 additional projects are components of the The effect of the Pld6 and Dnmt3l mutations on DNA methylation and expression of retrotransposons in mouse male germ cells.
mRNA sequencing analysis of P0 testes and FACS-purified leptotene/zygotene (L/Z) spermatocytes
Overall design: Compare transcriptomes of WT, Pld6 KO, and Dnmt3l KO germ cells to study the effects of these mutations affecting piRNA biogenesis and DNA methylation, respectively.
| Accession | PRJNA289871; GEO: GSE70889 |
| Data Type | Transcriptome or Gene expression |
| Scope | Multiisolate |
| Organism | Mus musculus[Taxonomy ID: 10090] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus |
| Publications | Inoue K et al., "Switching of dominant retrotransposon silencing strategies from posttranscriptional to transcriptional mechanisms during male germ-cell development in mice.", PLoS Genet, 2017 Jul;13(7):e1006926 |
| Submission | Registration date: 14-Jul-2015
Division of Epigenomics and Development, Medical Institute of Bioregulation, Kyushu University |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 17 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 17 |
| GEO DataSets | 1 |