Mycobacterium tuberculosis (ID 288586) - BioProject

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Accession: PRJNA288586 ID: 288586

Mycobacterium tuberculosis

Mycobacterium tuberculosis Genome sequencing and assembly

See Genome Information for Mycobacterium tuberculosis

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3033 additional projects are related by organism.

Whole genome sequencing of Mycobacterium tuberculosis isolates from Lineage 4, primarily from New York and New Jersey (USA), for phylogenetic reconstruction and population genetic analysis

Accession	PRJNA288586
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Mycobacterium tuberculosis[Taxonomy ID: 1773] Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis
Submission	Registration date: 15-Sep-2015 Columbia University Mailman School of Public Health
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	12427
WGS master	34
Other datasets
BioSample	35
Assembly	34

Assembly details:

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Contig

Total

24
10
34

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_001445535.1	LKMH00000000	SAMN03813779	AH26_28866	Mycobacterium tuberculosis
GCA_001445515.1	LKMF00000000	SAMN03813774	BE_116771	Mycobacterium tuberculosis
GCA_001445525.1	LKMI00000000	SAMN04129542	C_913	Mycobacterium tuberculosis
GCA_001445495.1	LKMG00000000	SAMN03813780	AU_8623	Mycobacterium tuberculosis
GCA_001445435.1	LKIJ00000000	SAMN03813797	H_13571	Mycobacterium tuberculosis
GCA_001445455.1	LKIP00000000	SAMN03813805	L_13621	Mycobacterium tuberculosis
GCA_001445445.1	LKIN00000000	SAMN03813803	I_15762	Mycobacterium tuberculosis
GCA_001445415.1	LKIQ00000000	SAMN03813806	V_13678	Mycobacterium tuberculosis
GCA_001445395.1	LKIO00000000	SAMN03813804	KI_19771	Mycobacterium tuberculosis
GCA_001445375.1	LKIM00000000	SAMN03813801	H6_12226	Mycobacterium tuberculosis
GCA_001445345.1	LKIL00000000	SAMN03813800	H6_10443	Mycobacterium tuberculosis
GCA_001445335.1	LKIK00000000	SAMN03813799	H55_24991	Mycobacterium tuberculosis
GCA_001445315.1	LKII00000000	SAMN03813796	H_13559	Mycobacterium tuberculosis
GCA_001445295.1	LKIH00000000	SAMN03813795	C53_20899	Mycobacterium tuberculosis
GCA_001445275.1	LKIG00000000	SAMN03813794	C49_20090	Mycobacterium tuberculosis
GCA_001445255.1	LKIF00000000	SAMN03813793	C4_16679	Mycobacterium tuberculosis
GCA_001445235.1	LKHH00000000	SAMN03813792	C34_13853	Mycobacterium tuberculosis
GCA_001445215.1	LKDS00000000	SAMN03813786	C_14229	Mycobacterium tuberculosis
GCA_001445185.1	LKDQ00000000	SAMN03813782	BE_13443	Mycobacterium tuberculosis
GCA_001445175.1	LKDO00000000	SAMN03813776	001_13432	Mycobacterium tuberculosis
GCA_001445155.1	LKDN00000000	SAMN03813775	BE3_11657	Mycobacterium tuberculosis
GCA_001445135.1	LKDT00000000	SAMN03813791	C30_19588	Mycobacterium tuberculosis
GCA_001445115.1	LKDR00000000	SAMN03813783	BE_14248	Mycobacterium tuberculosis
GCA_001445095.1	LKDP00000000	SAMN03813777	AH_14271	Mycobacterium tuberculosis
GCA_001445075.1	LKDM00000000	SAMN03813802	H6_7420	Mycobacterium tuberculosis
GCA_001445055.1	LKDL00000000	SAMN03813798	H_7300	Mycobacterium tuberculosis
GCA_001282555.1	LJIR00000000	SAMN03813790	C28_9904	Mycobacterium tuberculosis
GCA_001282575.1	LJIQ00000000	SAMN03813778	AH26_26663	Mycobacterium tuberculosis
GCA_001282465.1	LJIN00000000	SAMN03813787	C130	Mycobacterium tuberculosis
GCA_001282445.1	LJIK00000000	SAMN03813781	BE_10225	Mycobacterium tuberculosis
GCA_001282535.1	LJIP00000000	SAMN03813785	C_10367	Mycobacterium tuberculosis
GCA_001282525.1	LJIM00000000	SAMN03813788	C24_20545	Mycobacterium tuberculosis
GCA_001282455.1	LJIO00000000	SAMN03813789	C28_9319	Mycobacterium tuberculosis
GCA_001282475.1	LJIL00000000	SAMN03813784	BE_7556	Mycobacterium tuberculosis

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GOLD Multi-Isolate BioProject - 288586 [Genomes On Line Database]
GOLD Multi-Isolate BioProject - 288586
Genomes On Line Database
2713896836: Mycobacterium tuberculosis BE_10225 [Integrated Microbial Genomes]
2713896836: Mycobacterium tuberculosis BE_10225
Integrated Microbial Genomes
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2675903674: Mycobacterium tuberculosis H_7300
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2724678960: Mycobacterium tuberculosis C_913 [Integrated Microbial Genomes]
2724678960: Mycobacterium tuberculosis C_913
Integrated Microbial Genomes
SILVA LSU Database [SILVA]
SILVA LSU Database
SILVA
SILVA SSU Database [SILVA]
SILVA SSU Database
SILVA

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Mycobacterium tuberculosis Genome sequencing and assembly

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