soil metagenome (ID 28853) - BioProject

Format

Choose Destination

Accession: PRJNA28853 ID: 28853

soil metagenome

This project was undertaken to investigate antibiotic resistance and quorum sensing inducing genes in a remote, Alaskan soil. More...

Accession	PRJNA28853
Data Type	Targeted Locus (Loci)
Scope	Environment
Organism	soil metagenome[Taxonomy ID: 410658] unclassified sequences; metagenomes; ecological metagenomes; soil metagenome
Publications (total 4) Less...	Schloss PD et al., "Psychrotrophic strain of Janthinobacterium lividum from a cold Alaskan soil produces prodigiosin.", DNA Cell Biol, 2010 Sep;29(9):533-41 More... Schloss PD et al., "Psychrotrophic strain of Janthinobacterium lividum from a cold Alaskan soil produces prodigiosin.", DNA Cell Biol, 2010 Sep;29(9):533-41 Lang KS et al., "Novel florfenicol and chloramphenicol resistance gene discovered in Alaskan soil by using functional metagenomics.", Appl Environ Microbiol, 2010 Aug;76(15):5321-6 Allen HK et al., "Functional metagenomics reveals diverse beta-lactamases in a remote Alaskan soil.", ISME J, 2009 Feb;3(2):243-51 Schloss PD et al., "Toward a census of bacteria in soil.", PLoS Comput Biol, 2006 Jul 21;2(7):e92 Less...
Submission	Registration date: 27-Feb-2008 - University of Wisconsin-Madison - Handelsman lab - Joint Genome Institute
NCBI Links	BLAST BLAST against environmental sequences Metagenomics Book
Locus Tag Prefix	AKSOIL

Project Data:

Supplemental Content

soil metagenome
soil metagenome
Functional metagenome from Alaskan Soil

BioProject
seawater metagenome
seawater metagenome
Sorted cell/s from marine samples in Sargasso Sea - Pelagibacteraceae bacterium JGI BSAE-1614-1.H17 metagenome

BioProject
dust metagenome
dust metagenome
Microscopic specimens Raw sequence reads

BioProject
Bacillus cereus AH535
Bacillus cereus AH535
Bacillus cereus AH535 genome sequencing

BioProject

Your browsing activity is empty.

Activity recording is turned off.