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Accession: PRJNA288188 ID: 288188

Thunnus maccoyii (southern bluefin tuna)

RNA-Seq of Southern bluefin tuna (Thunnus maccoyii) gonad cells

See Genome Information for Thunnus maccoyii
RNA-Seq analysis of Southern bluefin tuna (Thunnus maccoyii) male and female gonad cells, to identify expression patterns of germ cell and gonadal-specific genes. RNA-Seq data produced by Illumina HiSeq 2500 platform, using the CASAVA pipeline version 1.8.2.
AccessionPRJNA288188
Data TypeRaw sequence reads
ScopeMultiisolate
OrganismThunnus maccoyii[Taxonomy ID: 8240]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Pelagiaria; Scombriformes; Scombridae; Thunnus; Thunnus maccoyii
PublicationsBar I et al., "Transcriptome analysis reveals differentially expressed genes associated with germ cell and gonad development in the Southern bluefin tuna (Thunnus maccoyii).", BMC Genomics, 2016 Mar 10;17:217
Grants
  • "Development of germ cell transplantation technology for the Australian aquaculture industry" (Grant ID 2011/730, Australian Seafood Cooperative Research Centre and Fisheries Research and Development Cooperation)
SubmissionRegistration date: 25-Jun-2015
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments20
Publications
PubMed1
PMC1
Other datasets
BioSample20
SRA Data Details
ParameterValue
Data volume, Gbases168
Data volume, Tbytes0.11

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