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Accession: PRJNA288085 ID: 288085

Solanum lycopersicum (tomato)

Large scale sequencing of small RNAs in tomato plants

See Genome Information for Solanum lycopersicum
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707 additional projects are related by organism.
In order to compare the small RNA (sRNA) population between the control and Potato spindle tuber viroid (PSTVd) upon infecting the plants, the tomato plants (Lycopersicum esculentum cv. More...
AccessionPRJNA288085; GEO: GSE70256
Data TypeTranscriptome or Gene expression
ScopeMonoisolate
OrganismSolanum lycopersicum[Taxonomy ID: 4081]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon; Solanum lycopersicum
PublicationsAdkar-Purushothama CR et al., "Potato spindle tuber viroid infection triggers degradation of chloride channel protein CLC-b-like and Ribosomal protein S3a-like mRNAs in tomato plants.", Sci Rep, 2017 Aug 21;7(1):8341
SubmissionRegistration date: 25-Jun-2015
Biochemistry, Université de Sherbrooke
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments1
Publications
PubMed1
PMC1
Other datasets
BioSample1
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Mbases89
Data volume, Mbytes29

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