Display Settings:

Format

Send to:

Choose Destination
Accession: PRJNA288067 ID: 288067

Mus musculus (house mouse)

Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of Irf8 KO GMP)

See Genome Information for Mus musculus
Single cell RNA seq and bioinformatic analysis is used to characterize myeloid differentiation to uncover novel transcriptional networks and key drivers of hematoipoietic development Overall design: Single cell RNA seq of different hematopoietic populations integrated with Chip seq involving multiple markers
AccessionPRJNA288067; GEO: GSE70242
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsOlsson A et al., "Single-cell analysis of mixed-lineage states leading to a binary cell fate choice.", Nature, 2016 Sep 29;537(7622):698-702
SubmissionRegistration date: 24-Jun-2015
Grimes, Immunobiology, Cincinnati Childrens Hospital Medical Center
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments63
Publications
PubMed1
PMC1
Other datasets
BioSample63
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes2
SRA Data Details
ParameterValue
Data volume, Gbases19
Data volume, Mbytes12299

Supplemental Content

Recent activity

  • Mus musculus
    Mus musculus
    Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of Irf8 KO GMP)
    BioProject
  • Homo sapiens
    Homo sapiens
    Nuclear HNRNPA2B1 HITS-CLIP and RNA-seq
    BioProject
  • feces metagenome
    feces metagenome
    Enriched cells from koala feces incubated with labeled cellulose particles, San Francisco Zoo, California, United States - Koala_Koa2-3_H3 metagenome
    BioProject
  • Pseudomonas putida strain:SF1
    Pseudomonas putida strain:SF1
    Pseudomonas putida strain:SF1 Genome sequencing and assembly
    BioProject
  • Dermacoccus sp. PE3
    Dermacoccus sp. PE3
    Dermacoccus sp. PE3 Genome sequencing and assembly
    BioProject

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center