This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA288031; GEO: GSE70245 |
| Type | Umbrella project |
| Publications | Olsson A et al., "Single-cell analysis of mixed-lineage states leading to a binary cell fate choice.", Nature, 2016 Sep 29;537(7622):698-702 |
| Grants | - "Mechanisms of granulocyte homeostasis" (Grant ID R01 HL122661, National Heart, Lung and Blood Institute)
|
| Submission | Registration date: 24-Jun-2015
Grimes, Immunobiology, Cincinnati Childrens Hospital Medical Center |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 680 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 680 |
| GEO DataSets | 12 |
Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies encompasses the following 11 sub-projects:
| Project Type | Number of Projects |
| Epigenomics | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJNA287974 | Mus musculus | Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (ChIP-seq) (Grimes, Immunobiology, Cincinnati...) |
|
| Transcriptome or Gene expression | 10 |
BioProject
accession | Organism | Title |
|---|
| PRJNA288035 | Mus musculus | Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of bone marrow lineage-negative Sca1+ CD117+ cells) (Grimes, Immunobiology, Cincinnati...) | | PRJNA287970 | Mus musculus | Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (Bulk RNA-Seq) (Grimes, Immunobiology, Cincinnati...) | | PRJNA287969 | Mus musculus | Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq from CMP) (Grimes, Immunobiology, Cincinnati...) | | PRJNA288063 | Mus musculus | Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of GMP) (Grimes, Immunobiology, Cincinnati...) | | PRJNA288064 | Mus musculus | Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of Gfi1-/- GMP) (Grimes, Immunobiology, Cincinnati...) |
List all 10 'Transcriptome or Gene expression' projects...BioProject
accession | Organism | Title |
|---|
| PRJNA288035 | Mus musculus | Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of bone marrow lineage-negative Sca1+ CD117+ cells) (Grimes, Immunobiology, Cincinnati...) | | PRJNA287970 | Mus musculus | Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (Bulk RNA-Seq) (Grimes, Immunobiology, Cincinnati...) | | PRJNA287969 | Mus musculus | Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq from CMP) (Grimes, Immunobiology, Cincinnati...) | | PRJNA288063 | Mus musculus | Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of GMP) (Grimes, Immunobiology, Cincinnati...) | | PRJNA288064 | Mus musculus | Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of Gfi1-/- GMP) (Grimes, Immunobiology, Cincinnati...) | | PRJNA288065 | Mus musculus | Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of Gfi1-GFP GMP) (Grimes, Immunobiology, Cincinnati...) | | PRJNA288066 | Mus musculus | Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of bone marrow lineage-negative CD117+ CD34+ cells) (Grimes, Immunobiology, Cincinnati...) | | PRJNA288067 | Mus musculus | Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of Irf8 KO GMP) (Grimes, Immunobiology, Cincinnati...) | | PRJNA288068 | Mus musculus | Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of Irf8-GFP GMP) (Grimes, Immunobiology, Cincinnati...) | | PRJNA314338 | Mus musculus | Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of Gfi1-/- Irf8-/- GMP) (Grimes, Immunobiology, Cincinnati...) |
Less... |