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Accession: PRJNA287974 ID: 287974

Mus musculus (house mouse)

Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (ChIP-seq)

See Genome Information for Mus musculus
Single cell RNA seq and bioinformatic analysis is used to characterize myeloid differentiation to uncover novel transcriptional networks and key drivers of hematopoietic development Overall design: Single cell RNA seq of 4 different hematopoietic populations integrated with ChIP-Seq involving 4 different markers
AccessionPRJNA287974; GEO: GSE70237
Data TypeEpigenomics
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsOlsson A et al., "Single-cell analysis of mixed-lineage states leading to a binary cell fate choice.", Nature, 2016 Sep 29;537(7622):698-702
SubmissionRegistration date: 24-Jun-2015
Grimes, Immunobiology, Cincinnati Childrens Hospital Medical Center
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments5
Publications
PubMed1
PMC1
Other datasets
BioSample5
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes316
SRA Data Details
ParameterValue
Data volume, Gbases8
Data volume, Mbytes4701

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