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Accession: PRJNA287781 ID: 287781

Potato spindle tuber viroid

Large scale sequencing of PSTVd-RG1 sRNA in tomato plants

In order to analyze the production of small RNA (sRNA) by Potato spindle tuber viroid- RG1 strain (PSTVd-RG1) upon infecting the plants, the tomato plants (Lycopersicum esculentum cv. More...
AccessionPRJNA287781; GEO: GSE70166
Data TypeTranscriptome or Gene expression
ScopeMonoisolate
OrganismPotato spindle tuber viroid[Taxonomy ID: 12892]
Viruses; Pospiviroidae; Pospiviroid; Potato spindle tuber viroid
PublicationsAdkar-Purushothama CR et al., "Potato spindle tuber viroid infection triggers degradation of chloride channel protein CLC-b-like and Ribosomal protein S3a-like mRNAs in tomato plants.", Sci Rep, 2017 Aug 21;7(1):8341
SubmissionRegistration date: 23-Jun-2015
Biochemistry, Université de Sherbrooke
RelevanceUnknown
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments1
Publications
PubMed1
PMC1
Other datasets
BioSample1
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes16
SRA Data Details
ParameterValue
Data volume, Mbases87
Data volume, Mbytes27

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