This SuperSeries is composed of the SubSeries listed below.
Description of samples employed for the subseries NGS analyses including age, race, ER/PR immunohistochemistry results, ITIL/STIL scores and PAM50 classification is provided in the 'Supplementary Data1_Samples data.xlsx'.
Overall design: Refer to individual Series
| Accession | PRJNA287428; GEO: GSE69994 |
| Type | Umbrella project |
| Publications | Abba MC et al., "A Molecular Portrait of High-Grade Ductal Carcinoma In Situ.", Cancer Res, 2015 Sep 15;75(18):3980-90 |
| Submission | Registration date: 18-Jun-2015
Aldaz Lab, Molecular Carcinogenesis, The University of TX M.D. Anderson Cancer Center |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 64 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 64 |
| GEO DataSets | 3 |
This project encompasses the following 2 sub-projects:
| Project Type | Number of Projects |
| Epigenomics | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJNA287431 | Homo sapiens | A Molecular Portrait Of High-Grade Ductal Carcinoma In Situ (DCIS) [RRBS-seq] (Aldaz Lab, Molecular Carcinogenesis,...) |
|
| Transcriptome or Gene expression | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJNA284949 | Homo sapiens | A Molecular Portrait Of High-Grade Ductal Carcinoma In Situ (DCIS) [RNA-seq] (Aldaz Lab, Molecular Carcinogenesis,...) |
|