Homo sapiens (ID 287264) - BioProject

Display Settings:

Format

Summary
BioProject ID list
Accessions List

Send to:

Choose Destination

File
Clipboard
Collections
My Bibliography

Accession: PRJNA287264 ID: 287264

Homo sapiens (human)

Genome wide DNA methylation profiling of normal breast, normal adjacent and breast cancer tissue

See Genome Information for Homo sapiens

Navigate Across

66644 additional projects are related by organism.

The Illumina Infinium 450k Human DNA methylation Beadchip was used to obtain DNA methylation profiles across approximately 480,000 CpGs in a total of 407 samples, including 50 normal samples from healthy women, 42 matched normal-adjacent breast cancer pairs (84 samples), 263 unmatched breast cancers, 7 normal samples from BRCA1 carriers and 4 BRCA1 breast cancers. More...

Accession	PRJNA287264; GEO: GSE69914
Data Type	Epigenomics
Scope	Multiisolate
Organism	Homo sapiens[Taxonomy ID: 9606] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
Publications (total 5) Less...	Gao Y et al., "DNA Methylation Patterns in Normal Tissue Correlate more Strongly with Breast Cancer Status than Copy-Number Variants.", EBioMedicine, 2018 May;31:243-252 More... Gao Y et al., "DNA Methylation Patterns in Normal Tissue Correlate more Strongly with Breast Cancer Status than Copy-Number Variants.", EBioMedicine, 2018 May;31:243-252 Teschendorff AE et al., "DNA methylation outliers in normal breast tissue identify field defects that are enriched in cancer.", Nat Commun, 2016 Jan 29;7:10478 Teschendorff AE et al., "Stochastic epigenetic outliers can define field defects in cancer.", BMC Bioinformatics, 2016 Apr 22;17:178 Yang Z et al., "An integrative pan-cancer-wide analysis of epigenetic enzymes reveals universal patterns of epigenomic deregulation in cancer.", Genome Biol, 2015 Jul 14;16:140 Gao Y et al., "The integrative epigenomic-transcriptomic landscape of ER positive breast cancer.", Clin Epigenetics, 2015;7:126 Less...
Submission	Registration date: 16-Jun-2015 UCL Cancer Institute/Institute for Women's Health, University College London
Relevance	Medical

Project Data:

Resource Name	Number of Links
Publications
PubMed	5
PMC	5
Other datasets
GEO DataSets	1

GEO Data Details

Parameter	Value
Data volume, Spots	197603384
Data volume, Processed Mbytes	5498
Data volume, Supplementary Mbytes	2298

Supplemental Content

Related information

Full text in PMC
PMC links
Genome
Related Genomes
GEO DataSets
GEO DataSet links
PubMed
PubMed Links
Taxonomy
Taxonomy Links

Recent activity

Clear Turn Off Turn On

Homo sapiens
Homo sapiens
miR-1246 association with distant metastasis and poor prognosis in breast cancer patients

BioProject
Citrus trifoliata
Citrus trifoliata
Genome sequencing as part of the Citrus Genomics Project

BioProject
bioreactor metagenome
bioreactor metagenome
Microbial diversity in combined UAF-UBAF system with novel sludge and coal cinder ceramic media for treating tetracycline wastewater Raw sequence reads

BioProject
Staphylococcus aureus
Staphylococcus aureus
Staphylococcus aureus Genome sequencing

BioProject

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

BioProject

Result Filters

Display Settings:

Send to:

Homo sapiens (human)

Genome wide DNA methylation profiling of normal breast, normal adjacent and breast cancer tissue

Supplemental Content

Related information

Recent activity

Simple NCBI Directory

Getting Started

Resources

Popular

Featured

NCBI Information