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Accession: PRJNA287142 ID: 287142

Arabidopsis thaliana strain:Col-0 or Ler-0 (thale cress)

High-throughput identification of T-DNA-flanking sequence with sequence capture

See Genome Information for Arabidopsis thaliana
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5934 additional projects are related by organism.
Agrobacterium-mediated transformation of plants with T-DNA is used both to introduce transgenes and for mutagenesis. More...
AccessionPRJNA287142
Data TypeTargeted Locus (Loci)
ScopeMonoisolate
OrganismArabidopsis thaliana[Taxonomy ID: 3702]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana
PublicationsInagaki S et al., "High-Throughput Analysis of T-DNA Location and Structure Using Sequence Capture.", PLoS One, 2015;10(10):e0139672
Grants
  • "Genome maintenance mechanisms in polyploid plants" (Grant ID 24-46, Japan Society for the Promotion of Science)
  • "Creation and high-precision characterization of novel Populus biomass germplasm" (Grant ID DE-SC0007183, DOE Office of Science, Office of Biological and Environmental Research)
SubmissionRegistration date: 16-Jun-2015
University of California Davis
NCBI Links
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments58
Publications
PubMed1
PMC1
Other datasets
BioSample29
SRA Data Details
ParameterValue
Data volume, Gbases1
Data volume, Mbytes784

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