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Accession: PRJNA287137 ID: 287137

Homo sapiens (human)

Ribosome profiling on glutamine-starved panel of luminal and basal breast cancer cell lines

See Genome Information for Homo sapiens
Four different breast cancer cell lines were grown either under unrestricted growth conditions or in medium lacking glutamine, and ribosome profliling was performed on material extracted from these samples Overall design: 1 replicate per condition
AccessionPRJNA287137; GEO: GSE69923
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsLoayza-Puch F et al., "Tumour-specific proline vulnerability uncovered by differential ribosome codon reading.", Nature, 2016 Feb 25;530(7591):490-4
SubmissionRegistration date: 16-Jun-2015
Agami Lab, Gene Regulation, Netherlands Cancer Institute
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments8
Publications
PubMed1
Other datasets
BioSample8
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes59
SRA Data Details
ParameterValue
Data volume, Gbases12
Data volume, Mbytes7523

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