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Accession: PRJDB3212 ID: 287121

Lotus japonicus

Transcriptome analysis of non-infected roots in Lotus japonicus.

See Genome Information for Lotus japonicus
Many genes specifically activated during arbuscular mycorrhizal symbiosis. To detect genes related in AM development, we incrementally isolated total RNA of non-infected plant roots were grown for 27 days after transplanting. Transcriptome of these roots was compared with that of AM roots.
AccessionPRJDB3212
Data TypeTranscriptome or Gene expression
ScopeMonoisolate
OrganismLotus japonicus[Taxonomy ID: 34305]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; robinioid clade; Loteae; Lotus; Lotus japonicus
Grants
  • "Science and technology research promotion program for agriculture, forestry, fisheries and food industry" (Grant ID 26036A, Ministry of Agriculture, Forestry and Fisheries)
SubmissionRegistration date: 15-Jun-2015
Shinshu University
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments3
Other datasets
BioSample1
SRA Data Details
ParameterValue
Data volume, Gbases7
Data volume, Mbytes4607

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