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Accession: PRJNA28667 ID: 28667

Marine Metagenome from Line Islands

Microbial and Viral Marine Metagenomes from Northern Line Islands

Microbial and viral metagenomes were isolated from water below the boundary layer of multiple atolls within the Northern Line Islands.
AccessionPRJNA28667
TypeUmbrella Metagenome project (Subtype:Metagenome)
Organismmarine metagenome[Taxonomy ID: 408172]
unclassified sequences; metagenomes; ecological metagenomes; marine metagenome
Publications
  • Dinsdale EA et al., "Microbial ecology of four coral atolls in the Northern Line Islands.", PLoS One, 2008 Feb 27;3(2):e1584
  • Dinsdale EA et al., "Functional metagenomic profiling of nine biomes.", Nature, 2008 Apr 3;452(7187):629-32
SubmissionRegistration date: 1-Feb-2008
SDSU Center for Universal Microbial Sequencing
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)8
SRA Experiments8
Publications
PubMed2
PMC1
Other datasets
BioSample8
Assembly8
SRA Data Details
ParameterValue
Data volume, Mbases273
Data volume, Mbytes699
Marine Metagenome from Line Islands encompasses the following 8 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Contigs

8
BioProject
accession
Assembly
level
OrganismTitle
PRJNA28343 Contigsmarine metagenomeMarine microbial metagenome isolated from Kingman Atoll (SDSU Center for Universal...)
PRJNA28345 Contigsmarine metagenomeMarine viral metagenome isolated from Kingman Atoll (SDSU Center for Universal...)
PRJNA28347 Contigsmarine metagenomeMarine microbial metagenome isolated from Christmas Atoll (SDSU Center for Universal...)
PRJNA28349 Contigsmarine metagenomeMarine viral metagenome isolated from Christmas Atoll (SDSU Center for Universal...)
PRJNA28363 Contigsmarine metagenomeMarine microbial metagenome isolated from Palmyra (SDSU Center for Universal...)
List all 8 'Genome sequencing' projects...

Supplemental Content

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