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Accession: PRJNA285699 ID: 285699

wastewater metagenome

Bacterial 16S rRNA gene amplicon 454 pyrosequencing of municipal wastewater treatment plant effluent samples Raw sequence reads

The goal of this study was to establish basic knowledge regarding the persistence

of microbial communities, focusing on standard bacterial fecal indicators and Bacteroidetes genetic microbial source tracking markers in municipal wastewater

in order to evaluate their suitability for automated sampling. More...

AccessionPRJNA285699
Data TypeRaw sequence reads
ScopeEnvironment
Organismwastewater metagenome[Taxonomy ID: 527639]
unclassified sequences; metagenomes; ecological metagenomes; wastewater metagenome
PublicationsMayer RE et al., "Automated Sampling Procedures Supported by High Persistence of Bacterial Fecal Indicators and Bacteroidetes Genetic Microbial Source Tracking Markers in Municipal Wastewater during Short-Term Storage at 5°C.", Appl Environ Microbiol, 2015 Aug;81(15):5134-43
Grants
  • "Elucidating faecal microbiota for source tracking" (Grant ID P22032, Austrian Science Fund)
  • "Faecal Source Tracking Along the Urban Waste Water Path" (Grant ID P22309, Austrian Science Fund)
  • "A unifying basis for faecal detection and source tracking" (Grant ID P23900, Austrian Science Fund)
  • "Vienna Doctoral Programme on Water Resource Systems" (Grant ID W1219-N22, Austrian Science Fund)
SubmissionRegistration date: 2-Jun-2015
Interuniversity Cooperation Centre Water & Health
- Vienna University of Technology
- Selah Genomics (former: EnGenCore)
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments16
Publications
PubMed1
PMC1
Other datasets
BioSample10
SRA Data Details
ParameterValue
Data volume, Mbases82
Data volume, Mbytes204

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