Vibrio cholerae O1 (ID 285678) - BioProject

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Accession: PRJNA285678 ID: 285678

Vibrio cholerae O1

Vibrio cholerae O1 Genome sequencing and assembly

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665 additional projects are related by organism.

The study was done to check the authenticity of MLVA for typing of Vibrio choerae based on whole genome sequence data.

Accession	PRJNA285678
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Vibrio cholerae O1[Taxonomy ID: 127906] Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; Vibrio cholerae O1
Submission	Registration date: 24-Jul-2015 University of maryland
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	4619
WGS master	42
Protein Sequences	3707
Other datasets
BioSample	42
Assembly	42

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

42
42

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_001187265.1	LGOE00000000	SAMN03839364	NHCM-03	Vibrio cholerae O1
GCA_001187255.1	LGNY00000000	SAMN03839340	EM-1542	Vibrio cholerae O1
GCA_001187245.1	LGNZ00000000	SAMN03839359	NHCC-080	Vibrio cholerae O1
GCA_001187225.1	LGNX00000000	SAMN03839358	NHCC-079	Vibrio cholerae O1
GCA_001187165.1	LGOU00000000	SAMN03839380	NHCM-054	Vibrio cholerae O1
GCA_001187185.1	LGNV00000000	SAMN03839356	NHCC-068	Vibrio cholerae O1
GCA_001187175.1	LGOS00000000	SAMN03839378	NHCM-048	Vibrio cholerae O1
GCA_001187145.1	LGOR00000000	SAMN03839377	NHCM-047	Vibrio cholerae O1
GCA_001187095.1	LGOQ00000000	SAMN03839376	NHCM-045	Vibrio cholerae O1
GCA_001187105.1	LGOT00000000	SAMN03839379	NHCM-053	Vibrio cholerae O1
GCA_001187085.1	LGOO00000000	SAMN03839374	NHCM-043	Vibrio cholerae O1
GCA_001187065.1	LGOM00000000	SAMN03839372	NHCM-033	Vibrio cholerae O1
GCA_001187025.1	LGON00000000	SAMN03839373	NHCM-037	Vibrio cholerae O1
GCA_001187015.1	LGOP00000000	SAMN03839375	NHCM-044	Vibrio cholerae O1
GCA_001186995.1	LGOL00000000	SAMN03839371	NHCM-029	Vibrio cholerae O1
GCA_001186985.1	LGOK00000000	SAMN03839370	NHCM-017	Vibrio cholerae O1
GCA_001186965.1	LGOJ00000000	SAMN03839369	NHCM-016A	Vibrio cholerae O1
GCA_001186925.1	LGOI00000000	SAMN03839368	NHCM-013	Vibrio cholerae O1
GCA_001186915.1	LGOH00000000	SAMN03839367	NHCM-012	Vibrio cholerae O1
GCA_001186905.1	LGOF00000000	SAMN03839365	NHCM-04	Vibrio cholerae O1
GCA_001186885.1	LGOG00000000	SAMN03839366	NHCM-06	Vibrio cholerae O1
GCA_001186835.1	LGOB00000000	SAMN03839361	NHCC-083	Vibrio cholerae O1
GCA_001186855.1	LGOD00000000	SAMN03839363	NHCM-02	Vibrio cholerae O1
GCA_001186825.1	LGOC00000000	SAMN03839362	NHCM-01	Vibrio cholerae O1
GCA_001186805.1	LGOA00000000	SAMN03839360	NHCC-081	Vibrio cholerae O1
GCA_001186785.1	LGNO00000000	SAMN03839350	NHCC-05	Vibrio cholerae O1
GCA_001186755.1	LGNR00000000	SAMN03839352	NHCC-019	Vibrio cholerae O1
GCA_001186735.1	LGNT00000000	SAMN03839354	NHCC-042	Vibrio cholerae O1
GCA_001186725.1	LGNS00000000	SAMN03839353	NHCC-021	Vibrio cholerae O1
GCA_001186665.1	LGNP00000000	SAMN03839349	NHCC-04	Vibrio cholerae O1
GCA_001186655.1	LGNQ00000000	SAMN03839351	NHCC-011	Vibrio cholerae O1
GCA_001186675.1	LGNU00000000	SAMN03839355	NHCC-048	Vibrio cholerae O1
GCA_001186645.1	LGNN00000000	SAMN03839348	EM-1706	Vibrio cholerae O1
GCA_001186595.1	LGNM00000000	SAMN03839347	EM-1690	Vibrio cholerae O1
GCA_001186585.1	LGNL00000000	SAMN03839346	EM-1690A	Vibrio cholerae O1
GCA_001186575.1	LGNJ00000000	SAMN03839344	EM-1654	Vibrio cholerae O1
GCA_001186565.1	LGNK00000000	SAMN03839345	EM-1688	Vibrio cholerae O1
GCA_001186495.1	LGNW00000000	SAMN03839357	NHCC-078	Vibrio cholerae O1
GCA_001186515.1	LGNG00000000	SAMN03839341	EM-1543	Vibrio cholerae O1
GCA_001186505.1	LGNI00000000	SAMN03839343	EM-1652A	Vibrio cholerae O1
GCA_001186485.1	LGNH00000000	SAMN03839342	EM-1626	Vibrio cholerae O1
GCA_001282605.1	LFZZ00000000	SAMN03839339	EC-051	Vibrio cholerae

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GOLD: Gp0143907 [Genomes On Line Database]
GOLD: Gp0143907
Genomes On Line Database
2713896800: Vibrio cholerae EC-051 [Integrated Microbial Genomes]
2713896800: Vibrio cholerae EC-051
Integrated Microbial Genomes
SILVA LSU Database [SILVA]
SILVA LSU Database
SILVA
SILVA SSU Database [SILVA]
SILVA SSU Database
SILVA

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Vibrio cholerae O1 Genome sequencing and assembly

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